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Ticket Resolution Summary Owner Reporter
#245 fixed SWARM 2.3 has problem reading MSEED files paulf
Description

I tried to open a MSEED file with SWARM (this has only one channel in it) and I was prompted for user identification of file type, but it failed with this warning:

2013-01-02 10:09:00: (WARNING) user input file type: /Users/paulf/usgs/run/caymans/event/WBCY.HHZ.CY.01 -> SEED
2013-01-02 10:09:00: (FINE) opening SEED file: /Users/paulf/usgs/run/caymans/event/WBCY.HHZ.CY.01
java.lang.NoClassDefFoundError: com/opensymphony/oscache/base/NeedsRefreshException
	at gov.usgs.swarm.data.FileDataSource$2.construct(FileDataSource.java:343)
	at gov.usgs.swarm.SwingWorker$2.run(SwingWorker.java:108)
	at java.lang.Thread.run(Thread.java:680)
Caused by: java.lang.ClassNotFoundException: com.opensymphony.oscache.base.NeedsRefreshException
	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
	... 3 more

I then tried the older version of Swarm 2.0 vintage and got a different error:

2013-01-02 10:11:51: user input file type: /Users/paulf/usgs/run/caymans/event/CBCY.HHZ.CY.01 -> SEED
2013-01-02 10:11:51: opening SEED file: /Users/paulf/usgs/run/caymans/event/CBCY.HHZ.CY.01
CodeTimer(seed/dis): 0.265
edu.iris.Fissures.seed.exception.SeedInputException: unable to determine record length (recLen=131072, maxRecordLength=65536, bufferLength=131072
	at edu.iris.Fissures.seed.director.SeedImportDirector.getRecLen(SeedImportDirector.java:58)
	at edu.iris.Fissures.seed.director.ImportDirector.getRecord(ImportDirector.java:182)
	at edu.iris.Fissures.seed.director.ImportDirector.read(ImportDirector.java:126)
	at edu.iris.Fissures.seed.director.ImportDirector.construct(ImportDirector.java:77)
	at edu.iris.Fissures.seed.director.ImportDirector.construct(ImportDirector.java:93)
	at gov.usgs.swarm.data.FileDataSource$2.construct(FileDataSource.java:349)
	at gov.usgs.swarm.SwingWorker$2.run(SwingWorker.java:108)
	at java.lang.Thread.run(Thread.java:680)
#257 fixed Swarm doesn't show "--" looking at Winston. stefan
Description

If I do a getmenu of the same stations on a wave_serverV and on a Winston, I see the stations look like "Q52A.BHN.TA.--" with both systems

If I look at the station on wave_serverV with Swarm I see Q52A.BHN.TA.-- but if I look at the Winston waveserver with Swarm, the station looks like "Q52A.BHN.TA"

#281 fixed Winston 1.1 fails while creating new database tables baker
Description

The version of Winston in the Earthworm distribution, 1.1, fails during the creation of its database tables.

2013-06-13 16:52:31: (SEVERE) Could not create tables in WWS database.  Are permissions set properly?
 ^------- Exception: com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException/You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '' at line 1
  ^---- Stack Trace: sun.reflect.NativeConstructorAccessorImpl.newInstance0/null:???
  ^---- Stack Trace: sun.reflect.NativeConstructorAccessorImpl.newInstance/null:???
  ^---- Stack Trace: sun.reflect.DelegatingConstructorAccessorImpl.newInstance/null:???
  ^---- Stack Trace: java.lang.reflect.Constructor.newInstance/null:???
  ^---- Stack Trace: com.mysql.jdbc.Util.handleNewInstance/Util.java:406
  ^---- Stack Trace: com.mysql.jdbc.Util.getInstance/Util.java:381
  ^---- Stack Trace: com.mysql.jdbc.SQLError.createSQLException/SQLError.java:1031
  ^---- Stack Trace: com.mysql.jdbc.SQLError.createSQLException/SQLError.java:957
  ^---- Stack Trace: com.mysql.jdbc.MysqlIO.checkErrorPacket/MysqlIO.java:3376
  ^---- Stack Trace: com.mysql.jdbc.MysqlIO.checkErrorPacket/MysqlIO.java:3308
  ^---- Stack Trace: com.mysql.jdbc.MysqlIO.sendCommand/MysqlIO.java:1837
  ^---- Stack Trace: com.mysql.jdbc.MysqlIO.sqlQueryDirect/MysqlIO.java:1961
  ^---- Stack Trace: com.mysql.jdbc.ConnectionImpl.execSQL/ConnectionImpl.java:2537
  ^---- Stack Trace: com.mysql.jdbc.ConnectionImpl.execSQL/ConnectionImpl.java:2466
  ^---- Stack Trace: com.mysql.jdbc.StatementImpl.execute/StatementImpl.java:735
  ^---- Stack Trace: gov.usgs.winston.db.WinstonDatabase.createTables/WinstonDatabase.java:305
  ^---- Stack Trace: gov.usgs.winston.db.WinstonDatabase.checkDatabase/WinstonDatabase.java:388
  ^---- Stack Trace: gov.usgs.winston.in.ew.ImportEW.processWinstonConfig/ImportEW.java:348
  ^---- Stack Trace: gov.usgs.winston.in.ew.ImportEW.processConfigFile/ImportEW.java:256
  ^---- Stack Trace: gov.usgs.winston.in.ew.ImportEW.<init>/ImportEW.java:196
  ^---- Stack Trace: gov.usgs.winston.in.ew.ImportEW.main/ImportEW.java:1066

The database tables are only partially created.

mysql> show tables;
+------------------+
| Tables_in_W_ROOT |
+------------------+
| channels         |
| grouplinks       |
| groupnodes       |
| instruments      |
| version          |
+------------------+

Tom Parker at AVO reports that this was a bug in Winston that has since been resolved.

Until there is an updated Winston included in Earthworm, the workaround is to manually create the missing tables. (Thanks to Tim MacDonald? for solving this.)

CREATE TABLE channelmetadata (sid INT,name VARCHAR(255),value TEXT,PRIMARY KEY (sid, name));
CREATE TABLE instrumentmetadata (imid INT PRIMARY KEY AUTO_INCREMENT,iid INT,name VARCHAR(255),value TEXT);
CREATE TABLE supp_data (sdid INT NOT NULL AUTO_INCREMENT,st DOUBLE NOT NULL,et DOUBLE,sdtypeid INT NOT NULL,sd_short VARCHAR(90) NOT NULL,sd TEXT NOT NULL,PRIMARY KEY (sdid));
CREATE TABLE supp_data_type (sdtypeid INT NOT NULL AUTO_INCREMENT,supp_data_type VARCHAR(20),supp_color VARCHAR(6) NOT NULL,draw_line TINYINT,PRIMARY KEY (sdtypeid),UNIQUE KEY (supp_data_type));
CREATE TABLE supp_data_xref (sdid INT NOT NULL,cid INT NOT NULL,UNIQUE KEY (sdid,cid));
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